Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXA31461.1Hypothetical protein; KEGG: fnu:FN0362 1.9e-08 ATP synthase subunit B K02109; Psort location: Cytoplasmic, score: 7.50. (146 aa)    
Predicted Functional Partners:
rsmD
RNA methyltransferase, RsmD family; KEGG: lmy:LM5923_2205 1.0e-30 hypothetical protein; K08316 16S rRNA (guanine966-N2)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
    0.903
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.820
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.685
KXA31457.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 4.8e-122 dhaK; dihydroxyacetone-related kinase K07030; Psort location: Cytoplasmic, score: 7.50.
 
     0.664
KXA31456.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.550
rpsA
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
   
 0.514
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
 
     0.505
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
 
     0.432
prkC
Putative serine/threonine-protein kinase PrkC; KEGG: ctc:CTC01225 4.9e-104 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.428
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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