STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31393.1KEGG: pmq:PM3016_1208 4.0e-08 AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase. (100 aa)    
Predicted Functional Partners:
KXA29470.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0968 4.8e-209 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.572
KXA29471.1
KEGG: snc:HMPREF0837_11106 2.0e-210 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.538
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.494
KXA31408.1
KEGG: snc:HMPREF0837_11105 6.5e-141 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.473
KXA31409.1
ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1451 2.5e-148 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.466
KXA29913.1
Transcriptional regulator, AraC family; KEGG: bay:RBAM_037970 2.2e-10 adaA; AdaA K13530; Psort location: Cytoplasmic, score: 9.67.
 
     0.444
KXA30897.1
Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-12 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: Cytoplasmic, score: 9.97.
  
     0.430
melR_1
Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 1.6e-14 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720.
  
     0.414
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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