STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31363.1comF family protein; KEGG: ccm:Ccan_18380 1.7e-14 protein COM101A; Psort location: Cytoplasmic, score: 7.50. (200 aa)    
Predicted Functional Partners:
smf
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 1.2e-43 protein smf K04096; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.884
comM
Mg chelatase-like protein; KEGG: ccm:Ccan_16640 6.3e-127 competence protein comM K07391; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.853
recD
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.820
KXA29648.1
KEGG: apb:SAR116_0501 2.8e-09 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.789
KXA30378.1
KEGG: apb:SAR116_0666 1.9e-22 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family.
 
    0.739
KXA31823.1
TIGR00252 family protein; KEGG: sat:SYN_00772 1.3e-16 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0102 family.
 
    0.732
KXA29446.1
Hypothetical protein; KEGG: pfa:PF08_0048 0.00021 ATP-dependent helicase, putative; K01509 adenosinetriphosphatase; Psort location: Cytoplasmic, score: 7.50.
  
    0.640
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.598
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.598
KXA31673.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 4.1e-07 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 7.50.
  
    0.589
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.