Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoR_1KEGG: cby:CLM_1853 5.0e-47 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96. (405 aa)    
Predicted Functional Partners:
phoP_1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: ava:Ava_1878 4.3e-41 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.973
regX3_2
Response regulator receiver domain protein; KEGG: pmg:P9301_12431 1.0e-41 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.886
phoP_2
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: ava:Ava_1878 2.2e-44 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.847
srrA_1
Putative transcriptional regulatory protein ResD; KEGG: eab:ECABU_c04760 1.1e-40 phoB; positive response regulator for pho regulon K07657; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.841
yycF
Transcriptional regulatory protein WalR; KEGG: ava:Ava_1878 8.6e-52 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.822
arlR_1
KEGG: bbp:BBPR_1604 1.7e-37 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.821
regX3_1
Putative sensory transduction protein RegX3; KEGG: pmj:P9211_01481 5.6e-32 two-component response regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.802
arlR_2
Putative transcriptional activator protein IrlR; KEGG: cnc:CNE_2c16400 2.0e-36 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.797
KXA29986.1
Putative transcriptional regulatory protein afsQ1; KEGG: pmg:P9301_12431 5.5e-41 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.780
phoB
Response regulator receiver domain protein; KEGG: pme:NATL1_11471 4.1e-29 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.767
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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