STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gerETranscriptional regulator, LuxR family; KEGG: scp:HMPREF0833_11677 5.3e-05 baeR; DNA-binding response regulator; Psort location: Cytoplasmic, score: 7.50. (175 aa)    
Predicted Functional Partners:
ccpA
Putative glucose-resistance amylase regulator; KEGG: apr:Apre_0881 1.3e-80 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
     
 0.793
dagK
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: ppo:PPM_0837 2.2e-46 yerQ; lipid kinase yegS K07029; Psort location: Cytoplasmic, score: 7.50.
       0.758
KXA31073.1
Hypothetical protein; KEGG: bcz:BCZK2894 1.8e-09 salK; sensor histidine kinase K14988; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.730
KXA31376.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.584
KXA31372.1
Hypothetical protein.
       0.580
KXA31371.1
Hypothetical protein; KEGG: ncr:NCU01912 2.2e-10 similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.562
rsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.485
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.