Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA31242.1Hypothetical protein; KEGG: edi:EDI_341030 0.00017 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50. (161 aa)    
Predicted Functional Partners:
dnaI_3
Replication initiator protein DnaA; KEGG: pfe:PSF113_0001 0.00065 dnaA; ATPase DnaA K02313; Psort location: Cytoplasmic, score: 7.50.
 
     0.946
KXA31244.1
Hypothetical protein.
 
     0.939
KXA31241.1
BRO family protein.
 
    0.913
traG_3
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 9.51.
       0.783
KXA31499.1
Hypothetical protein.
 
     0.755
KXA31204.1
Replication initiator protein A.
 
     0.750
KXA29979.1
Hypothetical protein.
 
     0.731
KXA31239.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.729
iap_4
NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72.
 
     0.686
KXA29919.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 7.50.
  
     0.590
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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