STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31204.1Replication initiator protein A. (142 aa)    
Predicted Functional Partners:
KXA31244.1
Hypothetical protein.
     0.988
dnaI_3
Replication initiator protein DnaA; KEGG: pfe:PSF113_0001 0.00065 dnaA; ATPase DnaA K02313; Psort location: Cytoplasmic, score: 7.50.
 
     0.845
KXA31242.1
Hypothetical protein; KEGG: edi:EDI_341030 0.00017 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
 
     0.753
KXA31499.1
Hypothetical protein.
 
     0.740
KXA29979.1
Hypothetical protein.
 
     0.730
iap_4
NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72.
 
   
 0.654
KXA29978.1
Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67.
  
    0.626
KXA29440.1
Hypothetical protein; KEGG: pic:PICST_74317 1.6e-06 TOP2; DNA topoisomerase II K03164.
 
     0.607
KXA30002.1
Hypothetical protein; KEGG: edi:EDI_024060 4.7e-31 trichohyalin K13173; Psort location: Cellwall, score: 9.21.
  
    0.601
dnaI_2
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.567
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.