STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31199.1Polysaccharide deacetylase; KEGG: paw:PAZ_c03800 6.6e-45 N-acetylgalactosaminoglycan deacetylase; Psort location: Extracellular, score: 9.60. (336 aa)    
Predicted Functional Partners:
KXA27739.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.35.
 
     0.678
KXA31195.1
Transporter, auxin efflux carrier family protein; KEGG: azo:azo2550 3.7e-28 mdcF3; putative malonate transporter K07088; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.640
pbpD
Transglycosylase; KEGG: cst:CLOST_1328 5.7e-174 penicillin-binding protein, 1a family; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51.
 
   
 0.625
KXA31198.1
Peptidase propeptide and YPEB domain protein; KEGG: tva:TVAG_387410 1.3e-06 viral A-type inclusion protein; K02331 DNA polymerase phi subunit.
       0.581
KXA31193.1
Hypothetical protein; KEGG: sud:ST398NM01_2520 1.0e-06 Diaminopimelate epimerase; Psort location: Cytoplasmic, score: 7.50.
 
     0.576
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
     0.548
KXA31497.1
Hypothetical protein; KEGG: efc:EFAU004_01404 8.3e-11 IS1251-like transposase; Psort location: Cytoplasmic, score: 7.50.
 
     0.538
msrAB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.522
KXA31197.1
Hydrid cluster protein-associated redox disulfide domain protein; KEGG: cpy:Cphy_2846 1.2e-10 hydroxylamine reductase; K00378 hydroxylamine reductase; Psort location: Cytoplasmic, score: 7.50.
 
     0.509
KXA31405.1
KEGG: hms:HMU13750 1.2e-100 type I restriction-modification system S protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.496
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.