Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA31088.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
KXA31087.1
Hypothetical protein.
       0.618
KXA31085.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
      
0.500
KXA31086.1
Hypothetical protein.
       0.500
KXA31089.1
Peptidase, M56 family; KEGG: saj:SaurJH9_0030 3.1e-15 Beta-lactamase K02547; Psort location: CytoplasmicMembrane, score: 10.00.
       0.463
KXA31090.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 6.6e-06 blaI; beta-lactamase K07737; Psort location: Cytoplasmic, score: 7.50.
       0.463
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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