Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXA30940.1KEGG: pfe:PSF113_4222 0.0021 abc transport system substrate-binding protein; Psort location: Cytoplasmic, score: 7.50. (337 aa)    
Predicted Functional Partners:
KXA30939.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: pmo:Pmob_0638 9.7e-12 monosaccharide-transporting ATPase K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    0.996
KXA31813.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: vsa:VSAL_I1370 7.8e-19 rbsC; ribose ABC transporter permease protein K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    0.984
metN2
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0695 2.3e-65 phosphonate-transporting ATPase K05833; Psort location: CytoplasmicMembrane, score: 8.78.
 
    0.957
ssuB
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0695 9.0e-57 phosphonate-transporting ATPase K05833; Psort location: CytoplasmicMembrane, score: 9.51.
 
    0.812
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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