STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30944.1KEGG: toc:Toce_1527 6.5e-141 sodium ion-translocating decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit; Psort location: CytoplasmicMembrane, score: 10.00. (370 aa)    
Predicted Functional Partners:
KXA30945.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.757
KXA30812.1
KEGG: crn:CAR_c13520 1.1e-154 oadA; oxaloacetate decarboxylase subunit alpha K01571; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.650
KXA29691.1
KEGG: lru:HMPREF0538_20007 5.3e-20 accB; acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.593
KXA30943.1
Hypothetical protein.
       0.567
gcdC
glutaconyl-CoA decarboxylase subunit gamma; KEGG: afn:Acfer_1835 1.2e-31 biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase.
 
   
 0.487
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.