STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30954.1Hypothetical protein; KEGG: bba:Bd3704 4.9e-14 zinc metallo protease; K01417 K07043; Psort location: Cytoplasmic, score: 7.50. (179 aa)    
Predicted Functional Partners:
cls_1
KEGG: cno:NT01CX_1068 2.0e-114 cardiolipin synthetase; K06131 cardiolipin synthase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.781
KXA30953.1
Hypothetical protein.
       0.773
typA
KEGG: cch:Cag_1518 1.4e-177 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 8.78.
       0.724
hisS
histidine--tRNA ligase; KEGG: tep:TepRe1_1928 3.4e-144 histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 10.00.
       0.409
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.