STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
typAKEGG: cch:Cag_1518 1.4e-177 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 8.78. (607 aa)    
Predicted Functional Partners:
cls_1
KEGG: cno:NT01CX_1068 2.0e-114 cardiolipin synthetase; K06131 cardiolipin synthase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.746
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.737
KXA30954.1
Hypothetical protein; KEGG: bba:Bd3704 4.9e-14 zinc metallo protease; K01417 K07043; Psort location: Cytoplasmic, score: 7.50.
       0.723
KXA30953.1
Hypothetical protein.
       0.718
engD
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
 
  
 0.638
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 3.3e-27 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS9 family.
  
    0.619
rpmI
Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL35 family.
  
    0.596
KXA27778.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
      0.594
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
  
 0.581
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
  
 
 0.580
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.