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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcdAglutaconyl-CoA decarboxylase subunit alpha; KEGG: afn:Acfer_1817 9.0e-231 carboxyl transferase; K01615 glutaconyl-CoA decarboxylase; Psort location: Cytoplasmic, score: 7.50. (597 aa)    
Predicted Functional Partners:
gcdC
glutaconyl-CoA decarboxylase subunit gamma; KEGG: afn:Acfer_1835 1.2e-31 biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase.
 
 0.986
KXA29690.1
Putative acetyl-CoA carboxylase, biotin carboxylase subunit; KEGG: cbi:CLJ_B3925 1.9e-118 accC; biotin carboxylase K01961; Psort location: Cytoplasmic, score: 7.50.
 
 0.972
gcdB
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
 
 0.963
gctA
KEGG: faa:HMPREF0389_01469 6.5e-125 glutaconate CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.958
gctB
KEGG: faa:HMPREF0389_01470 7.2e-119 glutaconate CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.955
KXA31888.1
butyryl-CoA dehydrogenase; KEGG: aoe:Clos_0091 3.8e-145 acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
 0.952
phaJ
MaoC-like protein; KEGG: hmc:HYPMC_4041 2.6e-34 phosphate butyryltransferase (fragment); Psort location: Cytoplasmic, score: 7.50.
  
 
 0.932
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
 
 0.924
cfiB
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.851
hgdA_6
R-phenyllactate dehydratase, medium subunit; KEGG: fnu:FN0207 7.3e-213 (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit; Psort location: Cytoplasmic, score: 7.50.
 
     0.825
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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