STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gctBKEGG: faa:HMPREF0389_01470 7.2e-119 glutaconate CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B; Psort location: Cytoplasmic, score: 9.97. (265 aa)    
Predicted Functional Partners:
gctA
KEGG: faa:HMPREF0389_01469 6.5e-125 glutaconate CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A; Psort location: Cytoplasmic, score: 9.97.
 0.999
gcdA
glutaconyl-CoA decarboxylase subunit alpha; KEGG: afn:Acfer_1817 9.0e-231 carboxyl transferase; K01615 glutaconyl-CoA decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.955
hgdA_6
R-phenyllactate dehydratase, medium subunit; KEGG: fnu:FN0207 7.3e-213 (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit; Psort location: Cytoplasmic, score: 7.50.
 
     0.828
hgdB_8
KEGG: fnu:FN0208 1.3e-160 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit K01726; Psort location: Cytoplasmic, score: 7.50.
 
     0.801
gcdC
glutaconyl-CoA decarboxylase subunit gamma; KEGG: afn:Acfer_1835 1.2e-31 biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase.
  
 
 0.725
gcdB
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
     
 0.588
hgdC_7
(R)-2-hydroxyglutaryl-CoA dehydratase activator; KEGG: afn:Acfer_1816 2.0e-82 CoA-substrate-specific enzyme activase; Psort location: Cytoplasmic, score: 7.50.
 
     0.582
KXA29677.1
Rubredoxin; KEGG: ova:OBV_16090 8.6e-242 acyl-CoA dehydrogenase/protein FixB; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.565
thlA
KEGG: apr:Apre_1351 5.6e-151 acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.527
KXA30975.1
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
       0.446
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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