STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31012.1holo-ACP synthase CitX; KEGG: clj:CLJU_c25290 7.1e-25 citX; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; K05964 holo-ACP synthase; Psort location: Cytoplasmic, score: 7.50. (173 aa)    
Predicted Functional Partners:
KXA31015.1
KEGG: fnu:FN1377 4.3e-41 CITG protein; K05966 triphosphoribosyl-dephospho-CoA synthase; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
citC
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
 
 0.985
citF
Citrate lyase, alpha subunit; KEGG: fnu:FN1380 3.5e-197 citrate lyase beta chain K01643; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.966
citE
KEGG: fnu:FN1379 8.6e-107 citrate lyase beta chain K01644; Psort location: Cytoplasmic, score: 9.97; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.966
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.936
tdcB_2
KEGG: apr:Apre_1062 8.6e-107 threonine dehydratase; K01754 threonine dehydratase; Psort location: Cytoplasmic, score: 7.50.
       0.531
KXA31017.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.531
ynaI
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 2.6e-16 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 9.99.
       0.531
KXA31019.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.531
citS
Putative citrate-sodium symporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.438
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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