STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31048.1Metallo-beta-lactamase domain protein; KEGG: rha:RHA1_ro01701 4.2e-27 beta lactamase K01467; Psort location: Cytoplasmic, score: 7.50. (335 aa)    
Predicted Functional Partners:
sulA
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
  
 0.579
KXA31049.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.564
KXA31867.1
Rhodanese-like protein; KEGG: sub:SUB0808 1.5e-14 pyridine nucleotide-disulfide oxidoreductase family protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.501
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.479
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.462
pta
KEGG: lsl:LSL_1151 6.5e-102 pta; phosphate acetyltransferase K00625; Psort location: Cytoplasmic, score: 7.50.
       0.438
KXA28690.1
Radical SAM domain protein; KEGG: fnu:FN0392 1.2e-45 oxygen-independent coproporphyrinogen III oxidase K00540; Psort location: Cytoplasmic, score: 7.50.
 
    0.428
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.417
arsC
Putative protein ArsC; KEGG: dsy:DSY4671 1.4e-44 hypothetical protein; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.405
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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