STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31056.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (302 aa)    
Predicted Functional Partners:
KXA31057.1
Hypothetical protein; KEGG: bhr:BH0830 0.0044 exonuclease SbcC K03546; Psort location: CytoplasmicMembrane, score: 8.16.
       0.775
KXA31054.1
Hypothetical protein.
       0.686
KXA29603.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 4.1e-16 lig1; DNA ligase I; K10747 DNA ligase 1.
  
     0.533
yvyD
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.522
KXA31817.1
Putative ATP synthase F0, A subunit; KEGG: del:DelCs14_5778 0.0052 monosaccharide-transporting ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.513
KXA31191.1
KEGG: bmq:BMQ_0078 1.2e-31 Tetrapyrrole (Corrin/Porphyrin) methylase, MazG protein K02499; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.475
sirC
KEGG: aar:Acear_0542 3.5e-16 siroheme synthase K02304; Psort location: Cytoplasmic, score: 7.50.
 
     0.436
KXA31058.1
Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.432
KXA31524.1
poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.422
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.