Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
comA_2Response regulator receiver domain protein; KEGG: pha:PSHAa1591 1.5e-15 uhpA; response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA) K07686; Psort location: Cytoplasmic, score: 9.97. (195 aa)    
Predicted Functional Partners:
KXA31073.1
Hypothetical protein; KEGG: bcz:BCZK2894 1.8e-09 salK; sensor histidine kinase K14988; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.942
drrA_2
KEGG: bya:BANAU_3288 4.1e-29 spaF; phosphate import ATP-binding protein pstB K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.788
KXA31074.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.778
KXA31075.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.778
KXA31077.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.584
cssS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssr:SALIVB_0669 1.7e-48 sivK; sensor protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.441
rsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.430
arlR_3
Putative response regulator ArlR; KEGG: pay:PAU_02990 2.6e-27 kdpE; DNA-binding transcriptional activator KdpE K07667; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.413
arlR_2
Putative transcriptional activator protein IrlR; KEGG: cnc:CNE_2c16400 2.0e-36 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.411
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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