Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
msrCKEGG: pfc:PflA506_1782 1.0e-32 yebR; free methionine-(R)-sulfoxide reductase YebR K07170; Psort location: Cytoplasmic, score: 7.50. (142 aa)    
Predicted Functional Partners:
mdeA
KEGG: bfr:BF3545 2.3e-168 O-acetylhomoserine (thiol)-lyase; K01740 O-acetylhomoserine (thiol)-lyase; Psort location: Cytoplasmic, score: 9.67.
    
  0.903
metK_2
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
  0.902
nfdA
Amidohydrolase family protein; KEGG: bmd:BMD_4787 1.4e-69 amidohydrolase K07047; Psort location: Cytoplasmic, score: 7.50.
       0.775
steT_1
KEGG: bde:BDP_1067 1.6e-22 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA30904.1
Hypothetical protein; KEGG: rdn:HMPREF0733_11258 4.2e-153 glycerol-3-phosphate dehydrogenase K09157; Psort location: Cytoplasmic, score: 7.50.
       0.662
KXA30905.1
ACT domain protein; KEGG: apo:Arcpr_1465 7.7e-10 phosphoserine phosphatase SerB K01079; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0237 family.
       0.661
KXA30906.1
Hypothetical protein; KEGG: cno:NT01CX_0795 4.9e-05 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
       0.471
msrAB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.419
KXA31080.1
Hypothetical protein.
       0.418
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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