close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-exporting ATPase; KEGG: apr:Apre_0987 8.9e-264 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99. (921 aa)    
Predicted Functional Partners:
csoR
Copper-sensing transcriptional repressor CsoR family protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.954
zosA
Heavy metal translocating P-type ATPase; KEGG: mru:mru_0534 4.5e-149 ATPase; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
0.901
cadA
Cadmium-exporting ATPase; KEGG: fpe:Ferpe_0668 3.8e-149 heavy metal-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.896
KXA31090.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 6.6e-06 blaI; beta-lactamase K07737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.809
KXA30917.1
Hypothetical protein.
       0.773
KXA30413.1
Hypothetical protein; KEGG: sta:STHERM_c18850 2.4e-15 DNA protection during starvation protein K04047; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.694
msrAB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.643
fieF
Cation diffusion facilitator family transporter; KEGG: bqy:MUS_3253 6.1e-35 cation efflux system protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.641
ziaR
Transcriptional repressor SmtB family protein; KEGG: rru:Rru_A1450 7.6e-08 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.632
cueR
Transcriptional regulator, MerR family; KEGG: vfi:VF_A0114 1.3e-07 methyltransferase K00599; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.625
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.