STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaEBeta-eliminating lyase; KEGG: dai:Desaci_0452 2.9e-67 threonine aldolase K01620; Psort location: Cytoplasmic, score: 7.50. (332 aa)    
Predicted Functional Partners:
KXA30921.1
Hemerythrin HHE cation binding domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.774
cobD
Putative histidinol-phosphate transaminase; KEGG: faa:HMPREF0389_00117 1.5e-86 histidinol-phosphate aminotransferase; K04720 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
       0.560
KXA30924.1
GumN protein; KEGG: bmd:BMD_5165 0.0099 rpoE; DNA-directed RNA polymerase subunit delta K03048.
       0.556
thrC_5
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
  
 
 0.548
pabB
KEGG: ava:Ava_3468 3.2e-148 anthranilate synthase, component II K13950; Psort location: Cytoplasmic, score: 9.97.
     
 0.474
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.