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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30848.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (383 aa)    
Predicted Functional Partners:
KXA30847.1
3-dehydroquinate synthase; KEGG: lrm:LRC_04080 2.8e-101 glycerol dehydrogenase; K00005 glycerol dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
     0.792
hgdA_6
R-phenyllactate dehydratase, medium subunit; KEGG: fnu:FN0207 7.3e-213 (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit; Psort location: Cytoplasmic, score: 7.50.
 
     0.557
hgdB_8
KEGG: fnu:FN0208 1.3e-160 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit K01726; Psort location: Cytoplasmic, score: 7.50.
 
     0.537
KXA29474.1
Phage transcriptional regulator, RinA family; KEGG: gwc:GWCH70_1138 5.6e-05 RNA polymerase sigma factor SigD K02405; Psort location: Cytoplasmic, score: 7.50.
  
     0.427
KXA28962.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.419
KXA29919.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 7.50.
  
     0.414
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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