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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcA_1ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 3.8e-22 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the bacterial solute-binding protein 9 family. (431 aa)    
Predicted Functional Partners:
znuC
KEGG: fma:FMG_0226 1.4e-51 zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.979
znuB_1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.4e-25 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.967
yusV
KEGG: cth:Cthe_0548 1.4e-44 ABC transporter-like protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.910
znuB_2
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.0e-26 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.902
KXA28661.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.3e-20 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.881
KXA28662.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 2.4e-12 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.834
KXA30890.1
Hypothetical protein; KEGG: sah:SaurJH1_2478 1.3e-05 ribulose-phosphate 3-epimerase K01783.
  
  
 0.745
KXA28660.1
Putative manganese transport system ATP-binding protein MntA; KEGG: ssg:Selsp_0237 3.8e-65 Phosphonate-transporting ATPase K11710; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.570
KXA28749.1
KEGG: apb:SAR116_2404 2.2e-05 30S ribosomal protein S14 K02954; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.540
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.516
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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