STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcpPutative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (332 aa)    
Predicted Functional Partners:
ydiB
Hydrolase, P-loop family; KEGG: efc:EFAU004_00653 3.2e-29 ATPase K06925; Psort location: Cytoplasmic, score: 7.50.
 
 0.997
ydiC
Universal bacterial protein YeaZ; KEGG: snc:HMPREF0837_10435 1.8e-28 gcp; M22 family O-sialoglycoprotein endopeptidase.
 
 
0.995
KXA30792.1
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
 
  
 0.881
nox_2
Nitroreductase family protein; KEGG: dat:HRM2_32740 5.9e-21 NAD(P)H-dependent dehydrogenase/reductase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.784
gpsA
KEGG: amt:Amet_2855 1.2e-93 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
      0.673
pheT
KEGG: amt:Amet_1640 1.1e-193 pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.625
KXA30788.1
Hypothetical protein; KEGG: cbh:CLC_1639 0.0021 sensor histidine kinase.
       0.551
KXA30787.1
Hypothetical protein.
       0.548
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
   
 0.544
thrC_5
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
  
 
 0.527
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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