STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30393.1KEGG: apb:SAR116_0013 2.4e-08 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (136 aa)    
Predicted Functional Partners:
cymR
Putative HTH-type transcriptional regulator CymR; KEGG: hmc:HYPMC_1094 2.1e-16 Rrf2 family transcriptional regulator K04487; Psort location: Cytoplasmic, score: 7.50.
  
     0.747
KXA30392.1
SAF domain protein; KEGG: bpu:BPUM_1429 2.2e-85 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
       0.663
nifS
KEGG: clb:Clo1100_2273 4.1e-100 cysteine desulfurase NifS; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.626
iscS_2
Putative cysteine desulfurase; KEGG: toc:Toce_1465 7.4e-85 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.626
KXA28857.1
Aminotransferase, class V; KEGG: apr:Apre_0365 6.5e-70 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.624
nifU
SUF system FeS assembly protein, NifU family; KEGG: hbo:Hbor_34450 4.6e-08 cysteine desulfurase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.617
KXA30391.1
Flavoprotein family protein; KEGG: bsu:BSU30060 1.6e-41 ytfP; NAD(FAD) dehydrogenase K07007; Psort location: Cytoplasmic, score: 7.50.
       0.563
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
     
 0.456
ppaC
CBS domain protein; KEGG: fma:FMG_1581 6.1e-161 putative manganese-dependent inorganic pyrophosphatase; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97.
  
    0.445
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.421
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.