STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30412.1PIN domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (362 aa)    
Predicted Functional Partners:
KXA30411.1
CarD-like protein; KEGG: apb:SAR116_1070 1.5e-15 transcriptional regulator K07736; Psort location: Cytoplasmic, score: 7.50.
       0.732
radA
Putative DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
  
 0.598
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
  
    0.540
KXA31450.1
ATP:guanido phosphotransferase, catalytic domain protein; KEGG: aar:Acear_0130 3.2e-36 ATP:guanido phosphotransferase; K00936; Psort location: Cytoplasmic, score: 7.50.
 
    0.511
KXA31449.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.489
ctsR
Putative transcriptional regulator CtsR; Belongs to the CtsR family.
 
    0.440
ybcJ
S4 domain protein YaaA; KEGG: fte:Fluta_1368 0.00028 ribosomal large subunit pseudouridine synthase B K06178; Psort location: Cytoplasmic, score: 7.50.
   
    0.403
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.