Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
crcBProtein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (120 aa)    
Predicted Functional Partners:
ygfU
Putative permease; KEGG: apb:SAR116_1372 7.0e-57 xanthine/uracil permease K03458; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
regX3_2
Response regulator receiver domain protein; KEGG: pmg:P9301_12431 1.0e-41 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
     
 0.554
yycG_2
KEGG: ctc:CTC02155 5.5e-80 sensory transduction protein kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
       0.550
clcA
Putative ATP synthase F0, A subunit; KEGG: cpr:CPR_1400 8.3e-86 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.412
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.410
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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