STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30530.1Methyltransferase domain protein; KEGG: bce:BC2100 2.1e-18 methyltransferase. (205 aa)    
Predicted Functional Partners:
KXA30531.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.606
KXA30165.1
Transcriptional regulator, TetR family; KEGG: ncy:NOCYR_4665 0.0036 putative transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 7.50.
 
 
 0.493
KXA28651.1
Methyltransferase domain protein; KEGG: afm:AFUA_5G15020 6.2e-12 arsenic methyltransferase Cyt19 K07755; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.491
KXA30517.1
KEGG: aur:HMPREF9243_0168 1.9e-127 ermC'; rRNA adenine N-6-methyltransferase K00561; Psort location: Cytoplasmic, score: 9.67.
 
   
 0.478
KXA28655.1
Hypothetical protein; KEGG: ser:SERP0449 6.7e-05 est; carboxylesterase K03928.
 
  
 0.465
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.459
KXA30527.1
Resolvase protein; KEGG: apb:SAR116_1288 3.4e-10 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.451
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.404
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.