STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA30172.1Methyltransferase domain protein; KEGG: mru:mru_0897 3.2e-36 SAM-dependent methyltransferase UbiE family. (202 aa)    
Predicted Functional Partners:
KXA30173.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.684
KXA29678.1
Nitroreductase family protein; KEGG: sat:SYN_01293 6.2e-26 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00540; Psort location: CytoplasmicMembrane, score: 8.16.
    
 0.674
KXA30907.1
Peptidase C26; KEGG: tsc:TSC_c10940 1.7e-37 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K07010; Psort location: Cytoplasmic, score: 7.50.
 
    0.507
KXA30174.1
Hypothetical protein; KEGG: ccm:Ccan_21120 8.8e-11 conserved transmembrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.474
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.459
KXA30171.1
BAAT/acyl-CoA thioester hydrolase protein; KEGG: ppo:PPM_2247 8.2e-24 M1_2542; putative acyl-CoA thioesterase.
  
    0.443
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.404
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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