STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29997.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (96 aa)    
Predicted Functional Partners:
KXA29998.1
Hypothetical protein.
       0.795
KXA29996.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.782
KXA29995.1
Hypothetical protein.
       0.746
iap_4
NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72.
       0.610
KXA30001.1
Hypothetical protein; KEGG: edi:EDI_048910 0.0057 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
       0.587
KXA29999.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.570
KXA30002.1
Hypothetical protein; KEGG: edi:EDI_024060 4.7e-31 trichohyalin K13173; Psort location: Cellwall, score: 9.21.
       0.557
KXA29979.1
Hypothetical protein.
       0.427
KXA29978.1
Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67.
       0.401
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.