Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA29998.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
KXA29996.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.948
iap_4
NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72.
 
    0.894
KXA29999.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 0.892
KXA29979.1
Hypothetical protein.
 
     0.837
KXA29997.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.799
KXA31615.1
Hypothetical protein; KEGG: lmf:LMOf2365_1681 0.0069 PTS system sucrose-specific transporter subunit IIBC; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.790
KXA30138.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.782
KXA29990.1
KEGG: efc:EFAU004_00298 2.8e-22 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.766
KXA29995.1
Hypothetical protein.
       0.746
KXA31618.1
Hypothetical protein; KEGG: fnu:FN0522 1.4e-05 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50.
     0.738
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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