Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXA29978.1 | KXA29979.1 | HMPREF3229_01038 | HMPREF3229_01039 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein. | 0.942 |
KXA29978.1 | KXA29998.1 | HMPREF3229_01038 | HMPREF3229_01033 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein. | 0.565 |
KXA29978.1 | KXA30002.1 | HMPREF3229_01038 | HMPREF3229_01037 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein; KEGG: edi:EDI_024060 4.7e-31 trichohyalin K13173; Psort location: Cellwall, score: 9.21. | 0.574 |
KXA29978.1 | KXA31242.1 | HMPREF3229_01038 | HMPREF3229_00495 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein; KEGG: edi:EDI_341030 0.00017 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50. | 0.434 |
KXA29978.1 | KXA31244.1 | HMPREF3229_01038 | HMPREF3229_00497 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein. | 0.779 |
KXA29978.1 | KXA31622.1 | HMPREF3229_01038 | HMPREF3229_00283 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein; KEGG: edi:EDI_341030 2.9e-05 intracellular protein transport protein USO1. | 0.927 |
KXA29978.1 | dnaI_3 | HMPREF3229_01038 | HMPREF3229_00496 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | Replication initiator protein DnaA; KEGG: pfe:PSF113_0001 0.00065 dnaA; ATPase DnaA K02313; Psort location: Cytoplasmic, score: 7.50. | 0.684 |
KXA29978.1 | hhaIM_2 | HMPREF3229_01038 | HMPREF3229_01043 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | KEGG: aur:HMPREF9243_0159 1.1e-156 dcm; DNA (cytosine-5-)-methyltransferase K00558; Psort location: Cytoplasmic, score: 7.50. | 0.857 |
KXA29978.1 | iap_4 | HMPREF3229_01038 | HMPREF3229_01035 | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72. | 0.888 |
KXA29979.1 | KXA29978.1 | HMPREF3229_01039 | HMPREF3229_01038 | Hypothetical protein. | Copper amine oxidase domain protein; KEGG: ddi:DDB_G0274493 2.7e-11 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 9.67. | 0.942 |
KXA29979.1 | KXA29996.1 | HMPREF3229_01039 | HMPREF3229_01031 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.798 |
KXA29979.1 | KXA29998.1 | HMPREF3229_01039 | HMPREF3229_01033 | Hypothetical protein. | Hypothetical protein. | 0.833 |
KXA29979.1 | KXA30002.1 | HMPREF3229_01039 | HMPREF3229_01037 | Hypothetical protein. | Hypothetical protein; KEGG: edi:EDI_024060 4.7e-31 trichohyalin K13173; Psort location: Cellwall, score: 9.21. | 0.890 |
KXA29979.1 | KXA31242.1 | HMPREF3229_01039 | HMPREF3229_00495 | Hypothetical protein. | Hypothetical protein; KEGG: edi:EDI_341030 0.00017 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50. | 0.730 |
KXA29979.1 | KXA31244.1 | HMPREF3229_01039 | HMPREF3229_00497 | Hypothetical protein. | Hypothetical protein. | 0.775 |
KXA29979.1 | KXA31622.1 | HMPREF3229_01039 | HMPREF3229_00283 | Hypothetical protein. | Hypothetical protein; KEGG: edi:EDI_341030 2.9e-05 intracellular protein transport protein USO1. | 0.752 |
KXA29979.1 | dnaI_3 | HMPREF3229_01039 | HMPREF3229_00496 | Hypothetical protein. | Replication initiator protein DnaA; KEGG: pfe:PSF113_0001 0.00065 dnaA; ATPase DnaA K02313; Psort location: Cytoplasmic, score: 7.50. | 0.827 |
KXA29979.1 | hhaIM_2 | HMPREF3229_01039 | HMPREF3229_01043 | Hypothetical protein. | KEGG: aur:HMPREF9243_0159 1.1e-156 dcm; DNA (cytosine-5-)-methyltransferase K00558; Psort location: Cytoplasmic, score: 7.50. | 0.837 |
KXA29979.1 | iap_4 | HMPREF3229_01039 | HMPREF3229_01035 | Hypothetical protein. | NlpC/P60 family protein; KEGG: bcg:BCG9842_B5644 2.2e-24 cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.72. | 0.901 |
KXA29996.1 | KXA29979.1 | HMPREF3229_01031 | HMPREF3229_01039 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.798 |
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