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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29985.1Hypothetical protein; KEGG: nam:NAMH_0844 7.8e-06 trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 7.50. (139 aa)    
Predicted Functional Partners:
KXA29984.1
Hypothetical protein.
       0.773
KXA30515.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.725
hhaIM_2
KEGG: aur:HMPREF9243_0159 1.1e-156 dcm; DNA (cytosine-5-)-methyltransferase K00558; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.603
topB_3
KEGG: apr:Apre_1822 3.7e-296 DNA topoisomerase type IA central domain-containing protein; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97.
     
 0.585
KXA28920.1
Resolvase protein; KEGG: apb:SAR116_1288 0.0070 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.585
KXA28948.1
Hypothetical protein.
 
     0.542
KXA31643.1
Hypothetical protein.
   
    0.540
KXA28954.1
Phage portal protein, HK97 family.
 
   
 0.538
KXA29986.1
Putative transcriptional regulatory protein afsQ1; KEGG: pmg:P9301_12431 5.5e-41 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
       0.503
KXA29987.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ckl:CKL_3553 7.1e-96 sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 8.78.
       0.499
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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