STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29987.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ckl:CKL_3553 7.1e-96 sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 8.78. (346 aa)    
Predicted Functional Partners:
KXA29986.1
Putative transcriptional regulatory protein afsQ1; KEGG: pmg:P9301_12431 5.5e-41 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 0.963
KXA29989.1
KEGG: crd:CRES_0317 2.3e-12 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.906
phoP_2
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: ava:Ava_1878 2.2e-44 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 0.858
KXA29988.1
ABC transporter, ATP-binding protein; KEGG: cby:CLM_0827 3.7e-90 macrolide export ATP-binding/permease MacB K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.851
yycF
Transcriptional regulatory protein WalR; KEGG: ava:Ava_1878 8.6e-52 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 0.826
phoB
Response regulator receiver domain protein; KEGG: pme:NATL1_11471 4.1e-29 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.67.
 
 0.819
arlR_3
Putative response regulator ArlR; KEGG: pay:PAU_02990 2.6e-27 kdpE; DNA-binding transcriptional activator KdpE K07667; Psort location: Cytoplasmic, score: 9.67.
 
 0.812
arlR_1
KEGG: bbp:BBPR_1604 1.7e-37 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 0.808
srrA_1
Putative transcriptional regulatory protein ResD; KEGG: eab:ECABU_c04760 1.1e-40 phoB; positive response regulator for pho regulon K07657; Psort location: Cytoplasmic, score: 9.97.
 
 0.806
phoP_1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: ava:Ava_1878 4.3e-41 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
 
 0.791
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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