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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29917.1Putative ferrous iron transport protein B; KEGG: mct:MCR_1166 3.9e-06 engA; GTP-binding protein EngA K03977; Psort location: CytoplasmicMembrane, score: 10.00. (673 aa)    
Predicted Functional Partners:
feoA
FeoA domain protein.
 
  
 0.932
KXA29916.1
FeoA domain protein.
  
  
 0.928
KXA29914.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_1370 1.2e-95 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.872
KXA29915.1
Putative phage head-tail adaptor; KEGG: osp:Odosp_1369 5.1e-102 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.864
KXA29918.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.753
KXA29913.1
Transcriptional regulator, AraC family; KEGG: bay:RBAM_037970 2.2e-10 adaA; AdaA K13530; Psort location: Cytoplasmic, score: 9.67.
 
   
 0.748
KXA29919.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 7.50.
 
    0.556
copA
Copper-exporting ATPase; KEGG: apr:Apre_0987 8.9e-264 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.545
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.419
psuK
HTH domain protein; KEGG: cbj:H04402_01237 3.1e-70 pseudouridine kinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.415
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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