STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29439.1Copper amine oxidase domain protein; KEGG: bbe:BBR47_04720 0.0023 cwlU; hypothetical protein; K01448 N-acetylmuramoyl-L-alanine amidase. (143 aa)    
Predicted Functional Partners:
KXA31622.1
Hypothetical protein; KEGG: edi:EDI_341030 2.9e-05 intracellular protein transport protein USO1.
 
      0.888
KXA30002.1
Hypothetical protein; KEGG: edi:EDI_024060 4.7e-31 trichohyalin K13173; Psort location: Cellwall, score: 9.21.
 
      0.848
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.744
KXA29440.1
Hypothetical protein; KEGG: pic:PICST_74317 1.6e-06 TOP2; DNA topoisomerase II K03164.
       0.735
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.494
topB_2
KEGG: seq:SZO_12820 7.2e-245 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.459
metG_2
Putative methionine--tRNA ligase, beta subunit; KEGG: fma:FMG_0987 1.4e-53 lysyl-tRNA synthetase class II; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 9.97.
       0.422
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.