STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29442.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (279 aa)    
Predicted Functional Partners:
KXA29441.1
Abortive infection protein AbiGI family protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.961
topB_2
KEGG: seq:SZO_12820 7.2e-245 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97.
       0.584
KXA31466.1
Toxin-antitoxin system, antitoxin component, HicB family.
 
     0.506
KXA30529.1
Phage tail component protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.469
KXA29440.1
Hypothetical protein; KEGG: pic:PICST_74317 1.6e-06 TOP2; DNA topoisomerase II K03164.
       0.423
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.