STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29459.1Putativeadenylate synthase; KEGG: apr:Apre_1763 1.1e-188 AMP-dependent synthetase and ligase; K04783 yersiniabactin salicyl-AMP ligase; Psort location: Cytoplasmic, score: 9.97. (528 aa)    
Predicted Functional Partners:
KXA29457.1
Thioesterase domain protein; KEGG: dae:Dtox_2679 1.3e-39 oleoyl-ACP hydrolase; Psort location: Cytoplasmic, score: 9.97.
  
 0.993
KXA29462.1
Condensation domain protein; KEGG: bcg:BCG9842_B2554 7.3e-41 bacitracin synthetase 1; Psort location: Cytoplasmic, score: 7.50.
 
 0.971
KXA29465.1
Condensation domain protein; KEGG: cds:CDC7B_2042 5.1e-73 irp2C; putative siderophore biosynthetic protein; Psort location: Cytoplasmic, score: 7.50.
 
 0.966
KXA29450.1
Salicylate synthase; KEGG: dsy:DSY2818 2.9e-99 hypothetical protein; K04781 salicylate synthetase; Psort location: Cytoplasmic, score: 9.67.
   
 0.961
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.959
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
    
 
 0.945
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.945
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.944
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
  
   0.944
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
   0.942
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.