STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29472.1KEGG: rlt:Rleg2_4805 1.9e-24 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00. (447 aa)    
Predicted Functional Partners:
KXA30998.1
Hypothetical protein; KEGG: eel:EUBELI_01147 1.8e-26 cytidylate kinase; K00945 cytidylate kinase; Psort location: Cytoplasmic, score: 7.50.
      0.862
KXA29470.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0968 4.8e-209 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.788
KXA29471.1
KEGG: snc:HMPREF0837_11106 2.0e-210 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.788
KXA29469.1
KEGG: bcz:BCZK3497 2.8e-10 adaA; AraC family transcriptional regulator K13530.
 
   
 0.599
rpsA
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.583
KXA29474.1
Phage transcriptional regulator, RinA family; KEGG: gwc:GWCH70_1138 5.6e-05 RNA polymerase sigma factor SigD K02405; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.541
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: fma:FMG_0793 7.2e-103 glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.533
KXA29919.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.494
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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