STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29476.1Resolvase protein; KEGG: fnu:FN0522 3.8e-06 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50. (572 aa)    
Predicted Functional Partners:
KXA29477.1
Resolvase protein; KEGG: tva:TVAG_332600 2.3e-07 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50.
 
    
0.845
KXA29478.1
Resolvase protein; KEGG: tva:TVAG_332600 6.2e-06 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50.
 
    
0.840
traG_2
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 9.96.
    0.696
traG_3
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 9.51.
    0.685
KXA29445.1
Helicase protein; KEGG: ase:ACPL_5928 1.5e-162 F-box DNA helicase protein 1.
 
     0.673
KXA31643.1
Hypothetical protein.
   
    0.540
KXA29475.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.537
KXA29479.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.472
KXA29447.1
KEGG: efc:EFAU004_00298 5.0e-24 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.462
KXA29474.1
Phage transcriptional regulator, RinA family; KEGG: gwc:GWCH70_1138 5.6e-05 RNA polymerase sigma factor SigD K02405; Psort location: Cytoplasmic, score: 7.50.
 
     0.455
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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