STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29478.1Resolvase protein; KEGG: tva:TVAG_332600 6.2e-06 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50. (506 aa)    
Predicted Functional Partners:
KXA29477.1
Resolvase protein; KEGG: tva:TVAG_332600 2.3e-07 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50.
 
    
0.858
KXA29476.1
Resolvase protein; KEGG: fnu:FN0522 3.8e-06 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50.
 
    
0.840
KXA29445.1
Helicase protein; KEGG: ase:ACPL_5928 1.5e-162 F-box DNA helicase protein 1.
 
     0.654
KXA29475.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.542
KXA31643.1
Hypothetical protein.
   
    0.540
KXA28645.1
Addiction module toxin, RelE/StbE family; KEGG: hip:CGSHiEE_07380 0.0018 glyS; glycyl-tRNA synthetase subunit beta K06218.
 
     0.523
KXA29479.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.476
KXA29474.1
Phage transcriptional regulator, RinA family; KEGG: gwc:GWCH70_1138 5.6e-05 RNA polymerase sigma factor SigD K02405; Psort location: Cytoplasmic, score: 7.50.
 
     0.450
dpnA_3
KEGG: cyj:Cyan7822_1878 2.6e-66 DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.430
KXA30184.1
Replication initiator protein A; KEGG: mhp:MHP7448_0256 9.8e-05 dnaX; DNA polymerase III subunits gamma and tau K02343; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.411
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.