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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdeAKEGG: bfr:BF3545 2.3e-168 O-acetylhomoserine (thiol)-lyase; K01740 O-acetylhomoserine (thiol)-lyase; Psort location: Cytoplasmic, score: 9.67. (426 aa)    
Predicted Functional Partners:
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.988
metE
KEGG: pdn:HMPREF9137_0954 3.6e-101 methionine synthase, vitamin-B12 independent; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.671
gltD
Glutamate synthase; KEGG: clj:CLJU_c37240 2.7e-261 glutamate synthase K00266; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.661
cysE
KEGG: cow:Calow_1932 2.5e-52 serine o-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.641
metQ_2
Putative D-methionine-binding lipoprotein MetQ; KEGG: pfe:PSF113_0025 1.4e-58 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the nlpA lipoprotein family.
  
    0.612
metQ_1
Lipoprotein, YaeC family; KEGG: pfe:PSF113_0025 4.1e-61 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the nlpA lipoprotein family.
  
    0.612
pcrA
Putative ATP-dependent DNA helicase PcrA; KEGG: apr:Apre_0982 2.6e-176 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
    0.586
yjcD
UvrD/REP helicase; KEGG: ccl:Clocl_0472 5.4e-114 DNA/RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
    0.514
hom_2
KEGG: fma:FMG_0319 2.7e-158 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.489
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.465
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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