STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA29559.1Putative membrane fusion protein; KEGG: edi:EDI_024680 8.6e-05 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 7.50. (390 aa)    
Predicted Functional Partners:
ebh_1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.1e-89 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 8.19.
 
 
 0.940
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
     0.836
KXA29558.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.813
KXA29556.1
S4 domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.807
lspA
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.805
rluD_2
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.803
KXA29572.1
Hypothetical protein; KEGG: cle:Clole_3979 2.9e-08 glucan endo-1,3-beta-D-glucosidase; Psort location: Cellwall, score: 9.21.
 
 
 
 0.783
KXA31478.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 6.2e-05 response regulator aspartate phosphatase K06361; Psort location: Cytoplasmic, score: 7.50.
  
 
 
 0.780
KXA31850.1
UBA/TS-N domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.775
KXA31555.1
YycH protein.
  
     0.773
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.