STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirCKEGG: aar:Acear_0542 3.5e-16 siroheme synthase K02304; Psort location: Cytoplasmic, score: 7.50. (270 aa)    
Predicted Functional Partners:
KXA29574.1
Hypothetical protein; KEGG: zma:100193573 0.0020 uncharacterized LOC100193573; K10712 cysteamine dioxygenase.
       0.745
KXA29575.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.741
KXA29572.1
Hypothetical protein; KEGG: cle:Clole_3979 2.9e-08 glucan endo-1,3-beta-D-glucosidase; Psort location: Cellwall, score: 9.21.
 
     0.672
KXA29603.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 4.1e-16 lig1; DNA ligase I; K10747 DNA ligase 1.
  
     0.628
KXA28198.1
Hypothetical protein; KEGG: hhd:HBHAL_4207 0.00016 pgdS; gamma-DL-glutamyl hydrolase; Psort location: Cellwall, score: 9.21.
 
     0.555
KXA29571.1
KEGG: bce:BC0902 7.1e-07 S-layer protein / N-acetylmuramoyl-L-alanine amidase K01448.
 
     0.522
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.513
gltD
Glutamate synthase; KEGG: clj:CLJU_c37240 2.7e-261 glutamate synthase K00266; Psort location: Cytoplasmic, score: 9.97.
     
 0.471
KXA31817.1
Putative ATP synthase F0, A subunit; KEGG: del:DelCs14_5778 0.0052 monosaccharide-transporting ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.453
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.449
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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