STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybaKYbaK/EbsC protein; KEGG: bya:BANAU_2580 2.8e-37 yjdI; prolyl-tRNA synthetase K03976; Psort location: Cytoplasmic, score: 7.50; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (156 aa)    
Predicted Functional Partners:
lacC
Hypothetical protein; KEGG: cbk:CLL_A3126 8.9e-18 pfkB; 1-phosphofructokinase K00917; Psort location: Cytoplasmic, score: 7.50.
       0.795
pgcA
KEGG: taf:THA_1027 9.4e-133 phosphoglucomutase/phosphomannomutase family protein; K01840 phosphomannomutase; Psort location: Cytoplasmic, score: 7.50.
     
 0.788
ycaC
Isochorismatase family protein; KEGG: ddf:DEFDS_0678 2.7e-32 isochorismatase hydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.767
sbcD
Ser/Thr phosphatase family protein; KEGG: sax:USA300HOU_1836 3.9e-24 sbcD; DNA repair exonuclease; Psort location: Cytoplasmic, score: 7.50.
  
    0.581
KXA29579.1
Hypothetical protein; KEGG: fnu:FN0522 6.5e-21 exonuclease SbcC K03546; Psort location: CytoplasmicMembrane, score: 8.16.
       0.560
KXA29577.1
Putative adenylyl cyclase CyaB; KEGG: apr:Apre_0779 1.1e-28 adenylate cyclase; K05873 adenylate cyclase, class 2; Psort location: Cytoplasmic, score: 7.50.
       0.555
KXA29578.1
Ser/Thr phosphatase family protein; KEGG: cbn:CbC4_0532 2.6e-57 metallophosphoesterase K07099; Psort location: Cytoplasmic, score: 7.50.
       0.555
aroA
Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.540
aroE
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.533
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
     
 0.526
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.