STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sipSKEGG: apr:Apre_1183 1.7e-30 signal peptidase I; K03100 signal peptidase I; Psort location: Cellwall, score: 8.75; Belongs to the peptidase S26 family. (172 aa)    
Predicted Functional Partners:
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
 
 0.910
ntpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.802
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.802
KXA29720.1
KEGG: fma:FMG_1077 1.5e-24 V-type sodium ATP synthase subunit E; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 7.50.
    
 0.800
KXA27757.1
Hypothetical protein; KEGG: apr:Apre_1012 6.8e-20 H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 7.50.
    
 0.800
ntpC
ATP synthase, subunit C; KEGG: fma:FMG_1076 2.2e-69 V-type ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50.
    
 0.799
KXA27761.1
ATP synthase, subunit C; KEGG: fma:FMG_1171 7.5e-37 V-type sodium ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50.
    
 0.799
ntpB_2
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
  
 
  0.787
ntpB_1
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
  
 
  0.787
ntpK
KEGG: fma:FMG_1078 2.4e-47 V-type ATP synthase subunit K; K02124 V-type H+-transporting ATPase subunit K; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase proteolipid subunit family.
    
 0.781
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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