Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA29649.1Hypothetical protein; KEGG: ddi:DDB_G0274493 8.1e-14 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 7.50. (644 aa)    
Predicted Functional Partners:
KXA31478.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 6.2e-05 response regulator aspartate phosphatase K06361; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.969
metG_1
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.766
KXA29603.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 4.1e-16 lig1; DNA ligase I; K10747 DNA ligase 1.
  
     0.765
KXA31555.1
YycH protein.
  
     0.753
moeZ
ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-42 thiF; thiamine biosynthesis protein ThiF.
  
  0.751
KXA29559.1
Putative membrane fusion protein; KEGG: edi:EDI_024680 8.6e-05 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 7.50.
 
     0.735
pheT
KEGG: amt:Amet_1640 1.1e-193 pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.731
KXA28198.1
Hypothetical protein; KEGG: hhd:HBHAL_4207 0.00016 pgdS; gamma-DL-glutamyl hydrolase; Psort location: Cellwall, score: 9.21.
 
     0.709
KXA29647.1
KEGG: amt:Amet_3057 1.3e-41 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta.
 
     0.690
KXA29572.1
Hypothetical protein; KEGG: cle:Clole_3979 2.9e-08 glucan endo-1,3-beta-D-glucosidase; Psort location: Cellwall, score: 9.21.
 
     0.683
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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