STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbMRelA/SpoT domain protein; KEGG: scf:Spaf_0989 5.8e-07 GTP pyrophosphokinase; K07816 putative GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50. (443 aa)    
Predicted Functional Partners:
cbf2
Putative peptidylprolyl isomerase PrsA3; KEGG: aoe:Clos_0228 1.4e-58 PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.788
KXA29654.1
Hypothetical protein; KEGG: say:TPY_3350 1.5e-08 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase; Psort location: Cytoplasmic, score: 7.50.
 
     0.641
pepD_4
Xaa-His dipeptidase; KEGG: mpz:Marpi_0957 6.4e-111 aminoacyl-histidine dipeptidase; K01270 dipeptidase D; Psort location: Cytoplasmic, score: 7.50.
       0.629
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.619
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
    0.611
relA
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
 0.580
KXA29653.1
Radical SAM protein family; KEGG: bce:BC4746 2.2e-53 Fe-S oxidoreductase K07139; Psort location: Cytoplasmic, score: 7.50.
       0.575
KXA29658.1
Acyl-ACP thioesterase; KEGG: clj:CLJU_c42340 4.8e-26 acyl-acyl carrier protein thioesterase; Psort location: Cytoplasmic, score: 7.50.
       0.574
KXA29652.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.570
KXA28655.1
Hypothetical protein; KEGG: ser:SERP0449 6.7e-05 est; carboxylesterase K03928.
  
     0.542
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.