STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbf2Putative peptidylprolyl isomerase PrsA3; KEGG: aoe:Clos_0228 1.4e-58 PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C; Psort location: CytoplasmicMembrane, score: 8.78. (249 aa)    
Predicted Functional Partners:
yjbM
RelA/SpoT domain protein; KEGG: scf:Spaf_0989 5.8e-07 GTP pyrophosphokinase; K07816 putative GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
  
    0.788
KXA30502.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.765
pepD_4
Xaa-His dipeptidase; KEGG: mpz:Marpi_0957 6.4e-111 aminoacyl-histidine dipeptidase; K01270 dipeptidase D; Psort location: Cytoplasmic, score: 7.50.
     
 0.669
KXA29652.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.623
KXA29654.1
Hypothetical protein; KEGG: say:TPY_3350 1.5e-08 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase; Psort location: Cytoplasmic, score: 7.50.
       0.596
KXA29658.1
Acyl-ACP thioesterase; KEGG: clj:CLJU_c42340 4.8e-26 acyl-acyl carrier protein thioesterase; Psort location: Cytoplasmic, score: 7.50.
       0.577
KXA29653.1
Radical SAM protein family; KEGG: bce:BC4746 2.2e-53 Fe-S oxidoreductase K07139; Psort location: Cytoplasmic, score: 7.50.
       0.574
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.535
KXA29651.1
Hypothetical protein.
       0.446
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
  
 0.446
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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